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StatescopeR Tutorial (Quickstart)

StatescopeR is an R wrapper around Statescope, a framework for:

Official package page (start here)​

https://bioc.r-universe.dev/StatescopeR

That page contains:

  • package downloads
  • reference manual (HTML/PDF)
  • installation snippet
  • build logs (useful if vignettes fail to build)

1) Installation

Option A — Install from Bioconductor (recommended)​

if (!requireNamespace("BiocManager", quietly = TRUE)) {
  install.packages("BiocManager")
}

# If you need Bioconductor devel (as shown on the package page):
BiocManager::install(version = "devel")

BiocManager::install("StatescopeR")

Option B — Install from r-universe (fast / convenient)​

install.packages(
  "StatescopeR",
  repos = c("https://bioc.r-universe.dev", "https://cloud.r-project.org")
)

Verify​

library(StatescopeR)
packageVersion("StatescopeR")